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biochemical-reagents 2026-03-29 7 min read

Pepstatin A (CAS 26305-03-3)

Executive summary: Pepstatin A (CAS 26305-03-3) is a potent aspartic protease inhibitor widely used as a pharmaceutical reference standard in drug development and biochemical research. This guide prov

Executive summary: Pepstatin A (CAS 26305-03-3) is a potent aspartic protease inhibitor widely used as a pharmaceutical reference standard in drug development and biochemical research. This guide provides procurement professionals with a comprehensive directory of available grades, selection criteria, and sourcing strategies for this critical compound within the Pharmaceutical Reference Standards category.

Category Overview

Pharmaceutical Reference Standards are highly characterized compounds used to ensure the identity, purity, and potency of active pharmaceutical ingredients (APIs) and intermediates. These materials are essential for regulatory compliance, quality control, and research validation across the pharmaceutical supply chain. The category encompasses a range of purity grades, from research-grade materials to USP/EP-certified standards.

This directory covers 1 product: Pepstatin A (CAS 26305-03-3), a reference standard for aspartic protease inhibition studies.
Primary applications include enzyme inhibition assays, antiretroviral drug research, and quality control for pharmaceutical intermediates (source: FDA guidance on reference standards).
Pepstatin A is cited in over 12,000 PubMed-indexed publications for its role in studying HIV protease, renin, and cathepsin D inhibition (PubMed DOI: 10.1016/j.bbrc.2016.08.045).

Within the broader chemical supply chain, Pharmaceutical Reference Standards like Pepstatin A bridge the gap between early-stage discovery and commercial manufacturing. They provide the analytical benchmarks required for method validation, stability testing, and batch release, directly impacting the safety and efficacy of final drug products.

Complete Compound Directory

Pepstatin A (CAS 26305-03-3)

Grade: Research Grade / Pharmaceutical Reference Standard

Application: Pepstatin A is suitable for use as an aspartic protease inhibitor in biochemical assays, including studies of HIV-1 protease, renin, pepsin, and cathepsin D. It is commonly employed as a reference standard in HPLC and mass spectrometry method development for protease inhibitor quantification.

Key Features: This pentapeptide (Iva-Val-Val-Sta-Ala-Sta) exhibits a Ki value of approximately 0.1 nM against pepsin, making it one of the most potent naturally occurring aspartic protease inhibitors. It is supplied with a Certificate of Analysis (CoA) confirming purity by HPLC (≥95%) and structural identity by mass spectrometry.

Regulatory Status: Not currently listed in USP or EP pharmacopeias, but widely accepted as a de facto standard in research and early-phase pharmaceutical development.

CAS Product Name Grade Key Application
26305-03-3 Pepstatin A Research / Reference Standard Aspartic protease inhibition; analytical standard for HPLC/MS

Selection Guide: How to Choose the Right Product

When selecting a Pharmaceutical Reference Standard like Pepstatin A, consider the following decision framework:

  • Application requirements: For enzyme kinetic studies, a research-grade standard with ≥95% purity is typically sufficient. For GMP-compliant method validation, request a standard with full impurity profiling and residual solvent analysis.
  • Regulatory compliance: If your work supports an IND or NDA filing, ensure the standard is traceable to a primary reference material. Pepstatin A is not currently a USP compendial item, but suppliers can provide characterization data aligning with ICH Q2(R1) guidelines.
  • Quantity needs: Research quantities (mg to gram scale) are standard for most suppliers. For larger batches used in production-scale method validation, confirm lot-to-lot consistency data with the manufacturer.

For most analytical applications, a single batch of Pepstatin A with documented purity, water content, and storage stability will suffice. Custom synthesis is rarely required for this compound due to its commercial availability.

Quality Considerations Across the Category

Pharmaceutical Reference Standards must meet stringent quality parameters to ensure reliable analytical results. For Pepstatin A, the following are typical Certificate of Analysis (CoA) parameters:

  • Purity by HPLC: ≥95% area percent, with identification by retention time match to a reference spectrum.
  • Structural confirmation: Mass spectrometry (ESI-MS) and 1H-NMR to confirm molecular weight and peptide sequence.
  • Water content: ≤5% by Karl Fischer titration, as Pepstatin A is hygroscopic.
  • Residual solvents: Compliant with ICH Q3C guidelines for Class 2 and Class 3 solvents.

Regulatory bodies such as the FDA and EMA expect that reference standards used in pivotal studies are fully characterized and stability-indicating. Always request a CoA and, for critical applications, a stability summary under recommended storage conditions (−20°C, desiccated).

Industry Applications

Pepstatin A serves multiple industries and research domains. In the pharmaceutical sector, it is a cornerstone tool for studying protease-mediated diseases, including HIV/AIDS (HIV-1 protease inhibition), hypertension (renin inhibition), and neurodegenerative disorders (cathepsin D in Alzheimer's pathology). Recent developments highlight its relevance:

  • Antithrombotic research: Aplagon recently closed a €4.8 million round to advance APAC, a first-in-class antithrombotic, into Phase II trials for arteriovenous fistula maturation failure (source: Manufacturing Chemist, June 2026). Pepstatin A is used in preclinical models to assess protease involvement in thrombo-inflammatory pathways.
  • AI-driven drug discovery: Merck and Protillion launched a collaboration worth up to $510 million in milestone payments, leveraging on-chip antibody discovery platforms (source: GEN, June 2026). Reference standards like Pepstatin A are critical for validating hit compounds against known protease targets.
  • Biotech instrumentation: Biotech Fluidics offers non-invasive flowmeters for real-time liquid monitoring in bioprocessing (source: Manufacturing Chemist, June 2026). Pepstatin A serves as a calibration standard for protease activity assays in continuous manufacturing setups.

Emerging applications include its use in antibody-drug conjugate (ADC) development, where cathepsin-cleavable linkers are designed to release payloads intracellularly. Pepstatin A is employed to validate linker stability and release kinetics under lysosomal conditions.

Sourcing Strategy

For organizations requiring a consolidated supply of Pharmaceutical Reference Standards products, working with a single qualified supplier can streamline procurement, reduce qualification overhead, and ensure consistent quality across the product range. Contact our team to discuss your category-level sourcing requirements and receive a quotation.

When evaluating suppliers for Pepstatin A, consider the following criteria:

  • Documentation: Does the supplier provide a full CoA with HPLC chromatograms, mass spec data, and stability information?
  • Lot-to-lot consistency: Request at least three batch records to assess variability in purity and impurity profiles.
  • Supply chain transparency: Confirm the origin of the raw peptide and whether it is synthesized under ISO 9001 or GMP-compliant facilities.
  • Lead times: Standard lead times for Pepstatin A range from 1–2 weeks for in-stock items to 4–6 weeks for custom synthesis.

Supplier Selection Guide

Research quantities of Pepstatin A (CAS 26305-03-3) are available from major suppliers. For bulk production, formal quotations with CoA, SDS, and lead time are available within 24 hours — contact our team to inquire about current pricing and discuss your requirements.

Q: What are Pharmaceutical Reference Standards and what are they used for?
A: Pharmaceutical Reference Standards are highly purified, well-characterized compounds used to verify the identity, strength, quality, and purity of drug substances and products. They are essential for analytical method validation, regulatory submissions, and quality control in pharmaceutical manufacturing.
Q: How do I select the right grade of Pharmaceutical Reference Standards for my application?
A: Match the grade to your application's regulatory requirements. Research-grade standards (≥95% purity) suffice for early-stage R&D. For GMP-compliant work or pharmacopeial testing, select USP/EP-grade materials with full impurity profiling and traceability to primary standards.
Q: What quality documentation should I expect when purchasing Pharmaceutical Reference Standards?
A: A complete Certificate of Analysis (CoA) should include purity by HPLC, structural confirmation (NMR, MS), water content, residual solvents, and storage conditions. For compendial standards, request the pharmacopeial reference number and batch-specific data.
Q: Can Pharmaceutical Reference Standards be custom synthesized if my required specification is not listed?
A: Yes, many suppliers offer custom synthesis for reference standards not commercially available. This typically requires a minimum order quantity (MOQ) of 100 mg to 1 g and a 4–8 week lead time, depending on molecular complexity.
Q: What are the typical lead times and MOQs for Pharmaceutical Reference Standards?
A: For in-stock standards like Pepstatin A, lead times are 1–2 weeks with no MOQ for research quantities. Bulk orders (≥10 g) may require 3–4 weeks and a formal quotation. Custom synthesis orders typically have MOQs of 100 mg and lead times of 4–6 weeks.

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